Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
PrnpP04925 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
PrnpP04925 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Gm7851-201ENSMUST00000117574 323 ntBASIC12.91□□□□□ -0.34
PrnpP04925 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.91□□□□□ -0.34
PrnpP04925 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.91□□□□□ -0.34
PrnpP04925 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.91□□□□□ -0.34
PrnpP04925 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.91□□□□□ -0.34
PrnpP04925 Gm807-202ENSMUST00000224929 408 ntBASIC12.91□□□□□ -0.34
PrnpP04925 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.91□□□□□ -0.34
PrnpP04925 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
PrnpP04925 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.91□□□□□ -0.34
PrnpP04925 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PrnpP04925 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
PrnpP04925 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.9□□□□□ -0.34
PrnpP04925 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.9□□□□□ -0.34
PrnpP04925 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
PrnpP04925 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.9□□□□□ -0.34
PrnpP04925 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.9□□□□□ -0.34
PrnpP04925 Gm23085-201ENSMUST00000157849 293 ntBASIC12.9□□□□□ -0.34
PrnpP04925 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
PrnpP04925 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.9□□□□□ -0.34
PrnpP04925 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.9□□□□□ -0.34
PrnpP04925 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.9□□□□□ -0.34
PrnpP04925 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Gm6905-201ENSMUST00000205729 511 ntBASIC12.9□□□□□ -0.34
PrnpP04925 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.9□□□□□ -0.34
PrnpP04925 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
PrnpP04925 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.9□□□□□ -0.34
PrnpP04925 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
PrnpP04925 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PrnpP04925 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
PrnpP04925 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
PrnpP04925 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
PrnpP04925 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.89□□□□□ -0.35
PrnpP04925 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.89□□□□□ -0.35
PrnpP04925 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.89□□□□□ -0.35
PrnpP04925 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Gm24891-201ENSMUST00000104391 136 ntBASIC12.89□□□□□ -0.35
PrnpP04925 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PrnpP04925 Gm14665-201ENSMUST00000122294 557 ntBASIC12.89□□□□□ -0.35
PrnpP04925 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
PrnpP04925 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
PrnpP04925 Gm44126-201ENSMUST00000204831 514 ntBASIC12.89□□□□□ -0.35
PrnpP04925 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
PrnpP04925 Gm44545-201ENSMUST00000208262 746 ntBASIC12.89□□□□□ -0.35
PrnpP04925 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.89□□□□□ -0.35
PrnpP04925 Gm4157-201ENSMUST00000211647 679 ntBASIC12.89□□□□□ -0.35
PrnpP04925 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.89□□□□□ -0.35
PrnpP04925 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.89□□□□□ -0.35
PrnpP04925 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms