Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.99□□□□□ -0.65
P04224 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.99□□□□□ -0.65
P04224 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.99□□□□□ -0.65
P04224 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
P04224 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
P04224 Gm37171-201ENSMUST00000192636 1185 ntBASIC10.99□□□□□ -0.65
P04224 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.99□□□□□ -0.65
P04224 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC10.99□□□□□ -0.65
P04224 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.99□□□□□ -0.65
P04224 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.99□□□□□ -0.65
P04224 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.99□□□□□ -0.65
P04224 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.99□□□□□ -0.65
P04224 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
P04224 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.99□□□□□ -0.65
P04224 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
P04224 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.99□□□□□ -0.65
P04224 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
P04224 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
P04224 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
P04224 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
P04224 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.98□□□□□ -0.65
P04224 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.98□□□□□ -0.65
P04224 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.98□□□□□ -0.65
P04224 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Gm29608-201ENSMUST00000190444 463 ntBASIC10.98□□□□□ -0.65
P04224 Gm37935-201ENSMUST00000192012 982 ntBASIC10.98□□□□□ -0.65
P04224 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
P04224 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.98□□□□□ -0.65
P04224 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.98□□□□□ -0.65
P04224 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.98□□□□□ -0.65
P04224 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.98□□□□□ -0.65
P04224 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
P04224 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
P04224 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
P04224 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.97□□□□□ -0.65
P04224 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.97□□□□□ -0.65
P04224 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.97□□□□□ -0.65
P04224 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.97□□□□□ -0.65
P04224 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
P04224 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
P04224 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms