Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col4a1P02463 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col4a1P02463 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col4a1P02463 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col4a1P02463 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col4a1P02463 CT009489.1-201ENSMUST00000227740 1893 ntBASIC15.05■□□□□ -0
Col4a1P02463 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col4a1P02463 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col4a1P02463 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col4a1P02463 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Col4a1P02463 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Col4a1P02463 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Col4a1P02463 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col4a1P02463 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.04■□□□□ -0
Col4a1P02463 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.04■□□□□ -0
Col4a1P02463 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
Col4a1P02463 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Col4a1P02463 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Gm3150-201ENSMUST00000166418 204 ntBASIC15.04■□□□□ -0
Col4a1P02463 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC15.04■□□□□ -0
Col4a1P02463 Gm12407-201ENSMUST00000180219 324 ntBASIC15.04■□□□□ -0
Col4a1P02463 Gm8492-201ENSMUST00000182375 987 ntBASIC15.04■□□□□ -0
Col4a1P02463 Gm9136-201ENSMUST00000193368 454 ntBASIC15.04■□□□□ -0
Col4a1P02463 Gm45113-201ENSMUST00000207518 165 ntBASIC15.04■□□□□ -0
Col4a1P02463 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Gm5380-201ENSMUST00000119296 2136 ntBASIC15.04■□□□□ -0
Col4a1P02463 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC15.04■□□□□ -0
Col4a1P02463 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC15.04■□□□□ -0
Col4a1P02463 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.04■□□□□ -0
Col4a1P02463 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.04■□□□□ -0
Col4a1P02463 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Gm18983-201ENSMUST00000222884 2729 ntBASIC15.04■□□□□ -0
Col4a1P02463 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Col4a1P02463 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.03■□□□□ -0
Col4a1P02463 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Col4a1P02463 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col4a1P02463 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC15.03■□□□□ -0
Col4a1P02463 n-R5s84-201ENSMUST00000122591 109 ntBASIC15.03■□□□□ -0
Col4a1P02463 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC15.03■□□□□ -0
Col4a1P02463 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Col4a1P02463 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.03■□□□□ -0
Col4a1P02463 Gm44270-201ENSMUST00000203084 1234 ntBASIC15.03■□□□□ -0
Col4a1P02463 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC15.03■□□□□ -0
Col4a1P02463 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC15.03■□□□□ -0
Col4a1P02463 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col4a1P02463 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.03■□□□□ -0
Col4a1P02463 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.03■□□□□ -0
Col4a1P02463 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.03■□□□□ -0
Col4a1P02463 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC15.03■□□□□ -0
Col4a1P02463 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Col4a1P02463 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
Col4a1P02463 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.03■□□□□ -0
Col4a1P02463 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC15.03■□□□□ -0
Col4a1P02463 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Col4a1P02463 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Col4a1P02463 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col4a1P02463 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col4a1P02463 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col4a1P02463 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.02■□□□□ -0
Col4a1P02463 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Col4a1P02463 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.02■□□□□ -0
Col4a1P02463 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.02■□□□□ -0
Col4a1P02463 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.02■□□□□ -0
Col4a1P02463 Gm8155-201ENSMUST00000216363 1612 ntBASIC15.02■□□□□ -0
Col4a1P02463 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms