Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ifna1P01572 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ifna1P01572 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ifna1P01572 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.52□□□□□ -0.73
Ifna1P01572 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ifna1P01572 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ifna1P01572 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ifna1P01572 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Ifna1P01572 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Ifna1P01572 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ifna1P01572 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
Ifna1P01572 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ifna1P01572 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ifna1P01572 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ifna1P01572 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.52□□□□□ -0.73
Ifna1P01572 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ifna1P01572 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ifna1P01572 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ifna1P01572 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ifna1P01572 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Ifna1P01572 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.51□□□□□ -0.73
Ifna1P01572 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ifna1P01572 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Ifna1P01572 Gm14760-201ENSMUST00000121831 999 ntBASIC10.51□□□□□ -0.73
Ifna1P01572 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Ifna1P01572 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.51□□□□□ -0.73
Ifna1P01572 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.51□□□□□ -0.73
Ifna1P01572 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.51□□□□□ -0.73
Ifna1P01572 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Mir7654-201ENSMUST00000185082 70 ntBASIC10.51□□□□□ -0.73
Ifna1P01572 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.51□□□□□ -0.73
Ifna1P01572 Gm42599-201ENSMUST00000201308 469 ntBASIC10.51□□□□□ -0.73
Ifna1P01572 Gm18473-201ENSMUST00000220543 868 ntBASIC10.51□□□□□ -0.73
Ifna1P01572 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.51□□□□□ -0.73
Ifna1P01572 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ifna1P01572 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ifna1P01572 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Ifna1P01572 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Ifna1P01572 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ifna1P01572 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Ifna1P01572 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ifna1P01572 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.5□□□□□ -0.73
Ifna1P01572 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.5□□□□□ -0.73
Ifna1P01572 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.5□□□□□ -0.73
Ifna1P01572 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ifna1P01572 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ifna1P01572 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ifna1P01572 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ifna1P01572 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Ifna1P01572 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ifna1P01572 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.5□□□□□ -0.73
Ifna1P01572 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ifna1P01572 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ifna1P01572 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ifna1P01572 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ifna1P01572 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ifna1P01572 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC10.5□□□□□ -0.73
Ifna1P01572 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ifna1P01572 Gm16215-201ENSMUST00000161990 637 ntBASIC10.5□□□□□ -0.73
Ifna1P01572 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.5□□□□□ -0.73
Ifna1P01572 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ifna1P01572 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC10.5□□□□□ -0.73
Ifna1P01572 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Ifna1P01572 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.5□□□□□ -0.73
Ifna1P01572 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.5□□□□□ -0.73
Ifna1P01572 Gm23363-201ENSMUST00000175024 79 ntBASIC10.5□□□□□ -0.73
Ifna1P01572 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.5□□□□□ -0.73
Ifna1P01572 Gm28631-201ENSMUST00000190740 334 ntBASIC10.5□□□□□ -0.73
Ifna1P01572 Gm10576-201ENSMUST00000191927 825 ntBASIC10.5□□□□□ -0.73
Ifna1P01572 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.5□□□□□ -0.73
Ifna1P01572 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.5□□□□□ -0.73
Ifna1P01572 Gm6218-201ENSMUST00000219812 628 ntBASIC10.5□□□□□ -0.73
Ifna1P01572 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.5□□□□□ -0.73
Ifna1P01572 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms