Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
ClppO88696 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ClppO88696 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
ClppO88696 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.28□□□□□ -0.44
ClppO88696 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.28□□□□□ -0.44
ClppO88696 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.28□□□□□ -0.44
ClppO88696 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ClppO88696 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.28□□□□□ -0.44
ClppO88696 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Gm2991-201ENSMUST00000173338 480 ntBASIC12.28□□□□□ -0.44
ClppO88696 Gm20482-202ENSMUST00000174729 825 ntBASIC12.28□□□□□ -0.44
ClppO88696 Gm6621-201ENSMUST00000193251 772 ntBASIC12.28□□□□□ -0.44
ClppO88696 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ClppO88696 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.28□□□□□ -0.44
ClppO88696 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.28□□□□□ -0.44
ClppO88696 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.28□□□□□ -0.44
ClppO88696 Morn2-202ENSMUST00000227729 656 ntBASIC12.28□□□□□ -0.44
ClppO88696 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.28□□□□□ -0.44
ClppO88696 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ClppO88696 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ClppO88696 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
ClppO88696 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClppO88696 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ClppO88696 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClppO88696 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClppO88696 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
ClppO88696 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClppO88696 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClppO88696 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
ClppO88696 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.27□□□□□ -0.44
ClppO88696 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
ClppO88696 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
ClppO88696 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
ClppO88696 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.27□□□□□ -0.45
ClppO88696 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Gm22121-201ENSMUST00000175148 54 ntBASIC12.27□□□□□ -0.45
ClppO88696 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
ClppO88696 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.27□□□□□ -0.45
ClppO88696 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.27□□□□□ -0.45
ClppO88696 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.27□□□□□ -0.45
ClppO88696 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.27□□□□□ -0.45
ClppO88696 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.27□□□□□ -0.45
ClppO88696 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.27□□□□□ -0.45
ClppO88696 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.27□□□□□ -0.45
ClppO88696 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
ClppO88696 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.26□□□□□ -0.45
ClppO88696 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.26□□□□□ -0.45
ClppO88696 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.26□□□□□ -0.45
ClppO88696 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.26□□□□□ -0.45
ClppO88696 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
ClppO88696 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms