Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pknox1O70477 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pknox1O70477 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Pknox1O70477 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.41□□□□□ -0.42
Pknox1O70477 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pknox1O70477 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.41□□□□□ -0.42
Pknox1O70477 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.41□□□□□ -0.42
Pknox1O70477 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Pknox1O70477 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.41□□□□□ -0.42
Pknox1O70477 Gm27847-201ENSMUST00000183711 107 ntBASIC12.41□□□□□ -0.42
Pknox1O70477 Gm27375-201ENSMUST00000183799 107 ntBASIC12.41□□□□□ -0.42
Pknox1O70477 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pknox1O70477 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.41□□□□□ -0.42
Pknox1O70477 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.41□□□□□ -0.42
Pknox1O70477 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.41□□□□□ -0.42
Pknox1O70477 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pknox1O70477 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.41□□□□□ -0.42
Pknox1O70477 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pknox1O70477 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.4□□□□□ -0.42
Pknox1O70477 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Pknox1O70477 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.4□□□□□ -0.42
Pknox1O70477 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
Pknox1O70477 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.4□□□□□ -0.42
Pknox1O70477 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.4□□□□□ -0.42
Pknox1O70477 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.4□□□□□ -0.42
Pknox1O70477 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.4□□□□□ -0.42
Pknox1O70477 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.4□□□□□ -0.42
Pknox1O70477 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.4□□□□□ -0.42
Pknox1O70477 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.4□□□□□ -0.42
Pknox1O70477 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pknox1O70477 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Pknox1O70477 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.4□□□□□ -0.43
Pknox1O70477 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pknox1O70477 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pknox1O70477 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pknox1O70477 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.39□□□□□ -0.43
Pknox1O70477 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pknox1O70477 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pknox1O70477 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.39□□□□□ -0.43
Pknox1O70477 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.39□□□□□ -0.43
Pknox1O70477 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pknox1O70477 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pknox1O70477 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Pknox1O70477 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Pknox1O70477 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pknox1O70477 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.39□□□□□ -0.43
Pknox1O70477 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pknox1O70477 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pknox1O70477 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pknox1O70477 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pknox1O70477 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pknox1O70477 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pknox1O70477 Gm24231-201ENSMUST00000104315 133 ntBASIC12.39□□□□□ -0.43
Pknox1O70477 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pknox1O70477 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.39□□□□□ -0.43
Pknox1O70477 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pknox1O70477 Gm12490-201ENSMUST00000120255 560 ntBASIC12.39□□□□□ -0.43
Pknox1O70477 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms