Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.56□□□□□ -0.72
Cxcl13O55038 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Gm23119-201ENSMUST00000158610 140 ntBASIC10.56□□□□□ -0.72
Cxcl13O55038 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Gm45433-201ENSMUST00000209386 247 ntBASIC10.56□□□□□ -0.72
Cxcl13O55038 Gm19208-201ENSMUST00000213861 912 ntBASIC10.56□□□□□ -0.72
Cxcl13O55038 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.56□□□□□ -0.72
Cxcl13O55038 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.56□□□□□ -0.72
Cxcl13O55038 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.56□□□□□ -0.72
Cxcl13O55038 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.56□□□□□ -0.72
Cxcl13O55038 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.56□□□□□ -0.72
Cxcl13O55038 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.56□□□□□ -0.72
Cxcl13O55038 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cxcl13O55038 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.55□□□□□ -0.72
Cxcl13O55038 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.55□□□□□ -0.72
Cxcl13O55038 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Gm7857-201ENSMUST00000117957 358 ntBASIC10.55□□□□□ -0.72
Cxcl13O55038 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Gm14760-201ENSMUST00000121831 999 ntBASIC10.55□□□□□ -0.72
Cxcl13O55038 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Gm17812-201ENSMUST00000204935 318 ntBASIC10.55□□□□□ -0.72
Cxcl13O55038 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cxcl13O55038 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cxcl13O55038 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms