Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smarce1O54941 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Smarce1O54941 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
Smarce1O54941 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.84□□□□□ -0.03
Smarce1O54941 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Smarce1O54941 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarce1O54941 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smarce1O54941 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC14.84□□□□□ -0.03
Smarce1O54941 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarce1O54941 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarce1O54941 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Smarce1O54941 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarce1O54941 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.83□□□□□ -0.03
Smarce1O54941 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarce1O54941 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smarce1O54941 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Smarce1O54941 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Smarce1O54941 Gm13492-201ENSMUST00000119772 665 ntBASIC14.83□□□□□ -0.04
Smarce1O54941 Gm14928-201ENSMUST00000120198 477 ntBASIC14.83□□□□□ -0.04
Smarce1O54941 Gm12363-201ENSMUST00000122250 668 ntBASIC14.83□□□□□ -0.04
Smarce1O54941 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.83□□□□□ -0.04
Smarce1O54941 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smarce1O54941 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Gm27892-201ENSMUST00000185017 106 ntBASIC14.83□□□□□ -0.04
Smarce1O54941 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.83□□□□□ -0.04
Smarce1O54941 Gm6745-201ENSMUST00000199216 526 ntBASIC14.83□□□□□ -0.04
Smarce1O54941 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC14.83□□□□□ -0.04
Smarce1O54941 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Smarce1O54941 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.83□□□□□ -0.04
Smarce1O54941 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.83□□□□□ -0.04
Smarce1O54941 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Cog3-203ENSMUST00000227473 4197 ntBASIC14.83□□□□□ -0.04
Smarce1O54941 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Smarce1O54941 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Smarce1O54941 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.83□□□□□ -0.04
Smarce1O54941 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smarce1O54941 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Smarce1O54941 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.82□□□□□ -0.04
Smarce1O54941 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smarce1O54941 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smarce1O54941 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smarce1O54941 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Smarce1O54941 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.82□□□□□ -0.04
Smarce1O54941 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.82□□□□□ -0.04
Smarce1O54941 Gm22331-201ENSMUST00000158066 136 ntBASIC14.82□□□□□ -0.04
Smarce1O54941 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.82□□□□□ -0.04
Smarce1O54941 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Smarce1O54941 Gm9002-201ENSMUST00000178437 499 ntBASIC14.82□□□□□ -0.04
Smarce1O54941 Gm27486-201ENSMUST00000184923 80 ntBASIC14.82□□□□□ -0.04
Smarce1O54941 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smarce1O54941 Gm29705-201ENSMUST00000212598 474 ntBASIC14.82□□□□□ -0.04
Smarce1O54941 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Gm24136-201ENSMUST00000083374 165 ntBASIC14.82□□□□□ -0.04
Smarce1O54941 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Smarce1O54941 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smarce1O54941 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smarce1O54941 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smarce1O54941 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms