Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
ChkaO54804 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
ChkaO54804 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.63□□□□□ -0.39
ChkaO54804 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ChkaO54804 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
ChkaO54804 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ChkaO54804 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
ChkaO54804 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.62□□□□□ -0.39
ChkaO54804 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
ChkaO54804 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
ChkaO54804 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.62□□□□□ -0.39
ChkaO54804 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.62□□□□□ -0.39
ChkaO54804 Gm11478-201ENSMUST00000117851 599 ntBASIC12.62□□□□□ -0.39
ChkaO54804 Gm16177-201ENSMUST00000120728 718 ntBASIC12.62□□□□□ -0.39
ChkaO54804 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ChkaO54804 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Rmrp-201ENSMUST00000157463 271 ntBASIC12.62□□□□□ -0.39
ChkaO54804 Gm27682-201ENSMUST00000183930 110 ntBASIC12.62□□□□□ -0.39
ChkaO54804 Gm29649-201ENSMUST00000185649 419 ntBASIC12.62□□□□□ -0.39
ChkaO54804 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.62□□□□□ -0.39
ChkaO54804 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
ChkaO54804 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.62□□□□□ -0.39
ChkaO54804 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
ChkaO54804 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.62□□□□□ -0.39
ChkaO54804 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
ChkaO54804 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
ChkaO54804 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ChkaO54804 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ChkaO54804 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Map1b-203ENSMUST00000223725 2669 ntBASIC12.62□□□□□ -0.39
ChkaO54804 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.62□□□□□ -0.39
ChkaO54804 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ChkaO54804 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ChkaO54804 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ChkaO54804 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.61□□□□□ -0.39
ChkaO54804 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.61□□□□□ -0.39
ChkaO54804 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.61□□□□□ -0.39
ChkaO54804 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ChkaO54804 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.61□□□□□ -0.39
ChkaO54804 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.61□□□□□ -0.39
ChkaO54804 Gm12390-201ENSMUST00000117897 397 ntBASIC12.61□□□□□ -0.39
ChkaO54804 Gm12384-201ENSMUST00000119228 919 ntBASIC12.61□□□□□ -0.39
ChkaO54804 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 Gm26927-201ENSMUST00000182385 965 ntBASIC12.61□□□□□ -0.39
ChkaO54804 Gm9022-201ENSMUST00000182482 992 ntBASIC12.61□□□□□ -0.39
ChkaO54804 Gm29127-201ENSMUST00000188304 517 ntBASIC12.61□□□□□ -0.39
ChkaO54804 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ChkaO54804 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.61□□□□□ -0.39
ChkaO54804 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.61□□□□□ -0.39
ChkaO54804 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ChkaO54804 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.61□□□□□ -0.39
ChkaO54804 Gm10268-201ENSMUST00000085340 555 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms