Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.36□□□□□ -0.59
Matn3O35701 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.36□□□□□ -0.59
Matn3O35701 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.36□□□□□ -0.59
Matn3O35701 Gm43703-201ENSMUST00000200523 763 ntBASIC11.36□□□□□ -0.59
Matn3O35701 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Matn3O35701 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.36□□□□□ -0.59
Matn3O35701 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.36□□□□□ -0.59
Matn3O35701 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.36□□□□□ -0.59
Matn3O35701 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Matn3O35701 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.35□□□□□ -0.59
Matn3O35701 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Matn3O35701 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Matn3O35701 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.35□□□□□ -0.59
Matn3O35701 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.35□□□□□ -0.59
Matn3O35701 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Matn3O35701 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Matn3O35701 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.35□□□□□ -0.59
Matn3O35701 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.35□□□□□ -0.59
Matn3O35701 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Gm24694-201ENSMUST00000180054 110 ntBASIC11.35□□□□□ -0.59
Matn3O35701 Gm27663-201ENSMUST00000184839 110 ntBASIC11.35□□□□□ -0.59
Matn3O35701 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Gm44855-201ENSMUST00000205725 362 ntBASIC11.35□□□□□ -0.59
Matn3O35701 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.35□□□□□ -0.59
Matn3O35701 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.35□□□□□ -0.59
Matn3O35701 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.35□□□□□ -0.59
Matn3O35701 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Matn3O35701 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.35□□□□□ -0.59
Matn3O35701 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Matn3O35701 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Matn3O35701 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.35□□□□□ -0.59
Matn3O35701 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.35□□□□□ -0.59
Matn3O35701 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Matn3O35701 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Matn3O35701 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.35□□□□□ -0.59
Matn3O35701 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Matn3O35701 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Matn3O35701 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.34□□□□□ -0.59
Matn3O35701 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Matn3O35701 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Matn3O35701 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.34□□□□□ -0.59
Matn3O35701 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn3O35701 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.34□□□□□ -0.59
Matn3O35701 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Matn3O35701 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Matn3O35701 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Matn3O35701 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Matn3O35701 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.34□□□□□ -0.59
Matn3O35701 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Matn3O35701 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Matn3O35701 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Matn3O35701 Gm17795-201ENSMUST00000214505 757 ntBASIC11.34□□□□□ -0.59
Matn3O35701 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.34□□□□□ -0.59
Matn3O35701 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms