Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Gm18307-201ENSMUST00000206864 949 ntBASIC11.38□□□□□ -0.59
Shisa8J3QNX5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shisa8J3QNX5 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Gm15429-201ENSMUST00000151268 798 ntBASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Gm6152-201ENSMUST00000151704 340 ntBASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.37□□□□□ -0.59
Shisa8J3QNX5 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Gm8227-201ENSMUST00000223306 571 ntBASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Shisa8J3QNX5 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Gm8805-201ENSMUST00000117848 313 ntBASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Gm16215-201ENSMUST00000161990 637 ntBASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.36□□□□□ -0.59
Shisa8J3QNX5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms