Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Acot6-202ENSMUST00000222921 3622 ntBASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcf11G3X9Z4 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Gm15566-201ENSMUST00000121130 590 ntBASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Gm22138-201ENSMUST00000158748 128 ntBASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Gm9192-201ENSMUST00000183221 985 ntBASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 AC169511.2-201ENSMUST00000226674 2063 ntBASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Gm18636-201ENSMUST00000218846 1066 ntBASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Ntrk2-209ENSMUST00000225950 2640 ntBASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcf11G3X9Z4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcf11G3X9Z4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcf11G3X9Z4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcf11G3X9Z4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcf11G3X9Z4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.58■□□□□ 0.57
Pcf11G3X9Z4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.58■□□□□ 0.57
Pcf11G3X9Z4 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
Pcf11G3X9Z4 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcf11G3X9Z4 Gm12899-201ENSMUST00000120565 551 ntBASIC18.58■□□□□ 0.56
Pcf11G3X9Z4 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcf11G3X9Z4 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcf11G3X9Z4 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC18.58■□□□□ 0.56
Pcf11G3X9Z4 Gm9136-201ENSMUST00000193368 454 ntBASIC18.58■□□□□ 0.56
Pcf11G3X9Z4 Gm43830-201ENSMUST00000198760 1067 ntBASIC18.58■□□□□ 0.56
Pcf11G3X9Z4 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcf11G3X9Z4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcf11G3X9Z4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcf11G3X9Z4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Gm15207-201ENSMUST00000119259 442 ntBASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Gm18367-201ENSMUST00000176139 600 ntBASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Gm44124-201ENSMUST00000204159 472 ntBASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Gm45550-201ENSMUST00000209380 946 ntBASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Gm38385-201ENSMUST00000194454 2351 ntBASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Gm8155-201ENSMUST00000216363 1612 ntBASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcf11G3X9Z4 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcf11G3X9Z4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms