Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Pcdh1F7BJK1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gm12928-201ENSMUST00000117115 573 ntBASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gm8515-201ENSMUST00000194852 576 ntBASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gm8463-201ENSMUST00000208573 613 ntBASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gm8598-201ENSMUST00000221184 836 ntBASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Pcdh1F7BJK1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.23□□□□□ -0.61
Pcdh1F7BJK1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms