Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdh11xF6ZNL5 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh11xF6ZNL5 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh11xF6ZNL5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh11xF6ZNL5 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh11xF6ZNL5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdh11xF6ZNL5 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Gm29396-201ENSMUST00000185659 716 ntBASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Gm44364-201ENSMUST00000198368 141 ntBASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdh11xF6ZNL5 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Gm12241-201ENSMUST00000118330 726 ntBASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Gm13786-201ENSMUST00000122371 333 ntBASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Mir8109-201ENSMUST00000184375 117 ntBASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Pcdh11xF6ZNL5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh11xF6ZNL5 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh11xF6ZNL5 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh11xF6ZNL5 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Pcdh11xF6ZNL5 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh11xF6ZNL5 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Pcdh11xF6ZNL5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh11xF6ZNL5 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh11xF6ZNL5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh11xF6ZNL5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh11xF6ZNL5 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh11xF6ZNL5 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh11xF6ZNL5 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Pcdh11xF6ZNL5 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Pcdh11xF6ZNL5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh11xF6ZNL5 Gm6023-201ENSMUST00000118217 606 ntBASIC13.77□□□□□ -0.21
Pcdh11xF6ZNL5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Pcdh11xF6ZNL5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms