Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TprF6ZDS4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
TprF6ZDS4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.51□□□□□ -0.57
TprF6ZDS4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TprF6ZDS4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TprF6ZDS4 Gm14034-201ENSMUST00000120147 551 ntBASIC11.51□□□□□ -0.57
TprF6ZDS4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.51□□□□□ -0.57
TprF6ZDS4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TprF6ZDS4 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.51□□□□□ -0.57
TprF6ZDS4 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.51□□□□□ -0.57
TprF6ZDS4 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TprF6ZDS4 Gm42511-201ENSMUST00000196160 234 ntBASIC11.51□□□□□ -0.57
TprF6ZDS4 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.51□□□□□ -0.57
TprF6ZDS4 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC11.51□□□□□ -0.57
TprF6ZDS4 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.51□□□□□ -0.57
TprF6ZDS4 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TprF6ZDS4 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
TprF6ZDS4 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TprF6ZDS4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TprF6ZDS4 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
TprF6ZDS4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TprF6ZDS4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.51□□□□□ -0.57
TprF6ZDS4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TprF6ZDS4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TprF6ZDS4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.51□□□□□ -0.57
TprF6ZDS4 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TprF6ZDS4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.5□□□□□ -0.57
TprF6ZDS4 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Gm5340-201ENSMUST00000203733 880 ntBASIC11.5□□□□□ -0.57
TprF6ZDS4 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
TprF6ZDS4 Gm18204-201ENSMUST00000209835 793 ntBASIC11.5□□□□□ -0.57
TprF6ZDS4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
TprF6ZDS4 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.5□□□□□ -0.57
TprF6ZDS4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.5□□□□□ -0.57
TprF6ZDS4 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.5□□□□□ -0.57
TprF6ZDS4 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
TprF6ZDS4 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
TprF6ZDS4 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.5□□□□□ -0.57
TprF6ZDS4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
TprF6ZDS4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
TprF6ZDS4 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC11.5□□□□□ -0.57
TprF6ZDS4 Gm15515-201ENSMUST00000117827 822 ntBASIC11.5□□□□□ -0.57
TprF6ZDS4 Gm14921-201ENSMUST00000118643 908 ntBASIC11.5□□□□□ -0.57
TprF6ZDS4 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.5□□□□□ -0.57
TprF6ZDS4 Gm35960-201ENSMUST00000202712 767 ntBASIC11.5□□□□□ -0.57
TprF6ZDS4 Gm45925-201ENSMUST00000218882 744 ntBASIC11.5□□□□□ -0.57
TprF6ZDS4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
TprF6ZDS4 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.5□□□□□ -0.57
TprF6ZDS4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.49□□□□□ -0.57
TprF6ZDS4 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TprF6ZDS4 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TprF6ZDS4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.49□□□□□ -0.57
TprF6ZDS4 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
TprF6ZDS4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
TprF6ZDS4 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TprF6ZDS4 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TprF6ZDS4 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
TprF6ZDS4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.49□□□□□ -0.57
TprF6ZDS4 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.49□□□□□ -0.57
TprF6ZDS4 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TprF6ZDS4 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.49□□□□□ -0.57
TprF6ZDS4 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.49□□□□□ -0.57
TprF6ZDS4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TprF6ZDS4 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TprF6ZDS4 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
TprF6ZDS4 Gm25201-201ENSMUST00000083093 170 ntBASIC11.49□□□□□ -0.57
TprF6ZDS4 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
TprF6ZDS4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TprF6ZDS4 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
TprF6ZDS4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
TprF6ZDS4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms