Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Pcdhb9E9Q5G2 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Gm45495-201ENSMUST00000200940 1700 ntBASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Pcdhb9E9Q5G2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Gm25700-201ENSMUST00000177693 110 ntBASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdhb9E9Q5G2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdhb9E9Q5G2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms