Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cpsf4lE9Q2N0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm9083-201ENSMUST00000120423 819 ntBASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm25043-201ENSMUST00000158604 212 ntBASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm23119-201ENSMUST00000158610 140 ntBASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm27516-201ENSMUST00000184237 98 ntBASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm5950-201ENSMUST00000213337 772 ntBASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm9899-201ENSMUST00000065519 555 ntBASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cpsf4lE9Q2N0 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Gm11531-201ENSMUST00000117614 555 ntBASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Gm13570-201ENSMUST00000140763 309 ntBASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cpsf4lE9Q2N0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms