Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Gm43380-201ENSMUST00000200421 220 ntBASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 AC022682.1-201ENSMUST00000224624 2023 ntBASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 CT009550.1-201ENSMUST00000225750 864 ntBASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Gm23105-201ENSMUST00000083719 134 ntBASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Gm13456-201ENSMUST00000118928 1365 ntBASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Gm14497-201ENSMUST00000119537 580 ntBASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Gm26782-203ENSMUST00000227103 751 ntBASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col6a3E9PWQ3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Gm8615-201ENSMUST00000025307 771 ntBASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Gm27444-201ENSMUST00000184157 137 ntBASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Gm43117-201ENSMUST00000198531 379 ntBASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Col6a3E9PWQ3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Col6a3E9PWQ3 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col6a3E9PWQ3 Gm14829-201ENSMUST00000121499 1138 ntBASIC12.08□□□□□ -0.47
Col6a3E9PWQ3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col6a3E9PWQ3 Gm22344-201ENSMUST00000122642 278 ntBASIC12.08□□□□□ -0.47
Col6a3E9PWQ3 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC12.08□□□□□ -0.47
Col6a3E9PWQ3 Gm43811-201ENSMUST00000202862 695 ntBASIC12.08□□□□□ -0.47
Col6a3E9PWQ3 AC192333.3-201ENSMUST00000224041 463 ntBASIC12.08□□□□□ -0.47
Col6a3E9PWQ3 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Col6a3E9PWQ3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.08□□□□□ -0.48
Col6a3E9PWQ3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.08□□□□□ -0.48
Col6a3E9PWQ3 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms