Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm12314-201ENSMUST00000118104 538 ntBASIC11.21□□□□□ -0.62
Shank1D3YZU1 Gm14999-201ENSMUST00000121039 624 ntBASIC11.21□□□□□ -0.62
Shank1D3YZU1 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.21□□□□□ -0.62
Shank1D3YZU1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Gm45598-202ENSMUST00000210719 986 ntBASIC11.21□□□□□ -0.62
Shank1D3YZU1 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.21□□□□□ -0.62
Shank1D3YZU1 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.21□□□□□ -0.62
Shank1D3YZU1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Shank1D3YZU1 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.21□□□□□ -0.62
Shank1D3YZU1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Shank1D3YZU1 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.2□□□□□ -0.62
Shank1D3YZU1 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.2□□□□□ -0.62
Shank1D3YZU1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.2□□□□□ -0.62
Shank1D3YZU1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.2□□□□□ -0.62
Shank1D3YZU1 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.2□□□□□ -0.62
Shank1D3YZU1 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.2□□□□□ -0.62
Shank1D3YZU1 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Shank1D3YZU1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Gm12899-201ENSMUST00000120565 551 ntBASIC11.19□□□□□ -0.62
Shank1D3YZU1 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.19□□□□□ -0.62
Shank1D3YZU1 Gm19187-201ENSMUST00000206781 892 ntBASIC11.19□□□□□ -0.62
Shank1D3YZU1 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Shank1D3YZU1 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms