Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Zcwpw2-203ENSMUST00000187803 372 ntBASIC6.4□□□□□ -1.39
Ubr4A2AN08 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ubr4A2AN08 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ubr4A2AN08 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC6.4□□□□□ -1.39
Ubr4A2AN08 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Gm13778-202ENSMUST00000146633 537 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Gm23432-201ENSMUST00000157181 131 ntBASIC6.4□□□□□ -1.39
Ubr4A2AN08 Gm8459-201ENSMUST00000162504 760 ntBASIC6.4□□□□□ -1.39
Ubr4A2AN08 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC6.4□□□□□ -1.39
Ubr4A2AN08 Gm25591-201ENSMUST00000177317 94 ntBASIC6.4□□□□□ -1.39
Ubr4A2AN08 AC121567.1-201ENSMUST00000227213 842 ntBASIC6.4□□□□□ -1.39
Ubr4A2AN08 AC107711.3-201ENSMUST00000228939 1035 ntBASIC6.4□□□□□ -1.39
Ubr4A2AN08 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Ubr4A2AN08 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm37736-201ENSMUST00000193564 2802 ntBASIC6.39□□□□□ -1.39
Ubr4A2AN08 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm7833-201ENSMUST00000183288 990 ntBASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm30671-201ENSMUST00000214898 318 ntBASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm10080-201ENSMUST00000075585 438 ntBASIC6.39□□□□□ -1.39
Ubr4A2AN08 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm16470-201ENSMUST00000182456 998 ntBASIC6.39□□□□□ -1.39
Ubr4A2AN08 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm45113-201ENSMUST00000207518 165 ntBASIC6.39□□□□□ -1.39
Ubr4A2AN08 AC107752.1-201ENSMUST00000219362 469 ntBASIC6.39□□□□□ -1.39
Ubr4A2AN08 AC138604.1-201ENSMUST00000226969 739 ntBASIC6.39□□□□□ -1.39
Ubr4A2AN08 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm42769-201ENSMUST00000198576 1659 ntBASIC6.39□□□□□ -1.39
Ubr4A2AN08 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC6.39□□□□□ -1.39
Ubr4A2AN08 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Gm45454-201ENSMUST00000211484 455 ntBASIC6.39□□□□□ -1.39
Ubr4A2AN08 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ubr4A2AN08 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms