Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Gm12138-201ENSMUST00000122180 951 ntBASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Gm7029-201ENSMUST00000173226 450 ntBASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Gm42599-201ENSMUST00000201308 469 ntBASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.27□□□□□ -0.13
Ccdc112A0AUP1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Gm45053-201ENSMUST00000206112 2499 ntBASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Gm24644-201ENSMUST00000157114 139 ntBASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Gm27486-201ENSMUST00000184923 80 ntBASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Map1b-203ENSMUST00000223725 2669 ntBASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc112A0AUP1 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Gm11964-201ENSMUST00000120982 444 ntBASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.25□□□□□ -0.13
Ccdc112A0AUP1 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms