Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Gm27847-201ENSMUST00000183711 107 ntBASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Gm27375-201ENSMUST00000183799 107 ntBASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Gm27839-201ENSMUST00000184242 106 ntBASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Gm9794-201ENSMUST00000202370 423 ntBASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Gm24526-201ENSMUST00000082921 158 ntBASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.43□□□□□ -0.42
Ccdc194A0A140LIT1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Snord83b-201ENSMUST00000104546 94 ntBASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Gm15703-201ENSMUST00000120250 880 ntBASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.42□□□□□ -0.42
Ccdc194A0A140LIT1 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Gm14760-201ENSMUST00000121831 999 ntBASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Gm12363-201ENSMUST00000122250 668 ntBASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.41□□□□□ -0.42
Ccdc194A0A140LIT1 Rmrp-201ENSMUST00000157463 271 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms