Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gm6415-201ENSMUST00000118488 348 ntBASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Gm6458-201ENSMUST00000211573 635 ntBASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Gm10371-202ENSMUST00000228010 1081 ntBASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Gm15467-201ENSMUST00000120582 445 ntBASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Gm43703-201ENSMUST00000200523 763 ntBASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Gm10175-201ENSMUST00000086013 645 ntBASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Trav7n-4A0A075B620 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Trav7n-4A0A075B620 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms