Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.51□□□□□ -0.41
H2afb2S4R1M3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Gm11597-201ENSMUST00000121423 964 ntBASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.5□□□□□ -0.41
H2afb2S4R1M3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.5□□□□□ -0.41
H2afb2S4R1M3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.5□□□□□ -0.41
H2afb2S4R1M3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Gm13315-201ENSMUST00000120376 991 ntBASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
H2afb2S4R1M3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb2S4R1M3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms