Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Scn8aQ9WTU3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Scn8aQ9WTU3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Gm4607-201ENSMUST00000206649 577 ntBASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Gm14017-201ENSMUST00000121934 386 ntBASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn8aQ9WTU3 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Scn8aQ9WTU3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms