Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tubd1Q9R1K7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.68□□□□□ -0.38
Tubd1Q9R1K7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubd1Q9R1K7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubd1Q9R1K7 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubd1Q9R1K7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubd1Q9R1K7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubd1Q9R1K7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubd1Q9R1K7 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tubd1Q9R1K7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubd1Q9R1K7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Tubd1Q9R1K7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tubd1Q9R1K7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tubd1Q9R1K7 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Gm2991-201ENSMUST00000173338 480 ntBASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Gm8885-201ENSMUST00000189382 598 ntBASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Cts7-204ENSMUST00000225321 1257 ntBASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Tubd1Q9R1K7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Gm12015-201ENSMUST00000117065 843 ntBASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Gm6334-201ENSMUST00000207083 228 ntBASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Gm9996-201ENSMUST00000070359 913 ntBASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tubd1Q9R1K7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tubd1Q9R1K7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubd1Q9R1K7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Tubd1Q9R1K7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubd1Q9R1K7 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubd1Q9R1K7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubd1Q9R1K7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.65□□□□□ -0.38
Tubd1Q9R1K7 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubd1Q9R1K7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubd1Q9R1K7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Tubd1Q9R1K7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubd1Q9R1K7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubd1Q9R1K7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Tubd1Q9R1K7 Gm14644-201ENSMUST00000116671 647 ntBASIC12.65□□□□□ -0.38
Tubd1Q9R1K7 Gm15198-201ENSMUST00000117283 177 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 112.8 ms