Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm11836-201ENSMUST00000121022 441 ntBASIC14.03□□□□□ -0.16
Cacna1fQ9JIS7 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.03□□□□□ -0.16
Cacna1fQ9JIS7 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1fQ9JIS7 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.03□□□□□ -0.16
Cacna1fQ9JIS7 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1fQ9JIS7 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1fQ9JIS7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1fQ9JIS7 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.03□□□□□ -0.16
Cacna1fQ9JIS7 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.03□□□□□ -0.16
Cacna1fQ9JIS7 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1fQ9JIS7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.03□□□□□ -0.16
Cacna1fQ9JIS7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1fQ9JIS7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cacna1fQ9JIS7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Cacna1fQ9JIS7 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cacna1fQ9JIS7 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Gm4726-201ENSMUST00000135604 736 ntBASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Gm6019-201ENSMUST00000148369 736 ntBASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Gm18893-201ENSMUST00000198416 943 ntBASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cacna1fQ9JIS7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cacna1fQ9JIS7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms