Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm2383-201ENSMUST00000181461 807 ntBASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Gm19187-201ENSMUST00000206781 892 ntBASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ube3bQ9ES34 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Gm32999-201ENSMUST00000192693 562 ntBASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Gm45224-201ENSMUST00000208203 414 ntBASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.86□□□□□ -0.03
Ube3bQ9ES34 AC154252.2-201ENSMUST00000223593 767 ntBASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.86□□□□□ -0.03
Ube3bQ9ES34 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Gm13296-201ENSMUST00000117854 997 ntBASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Gm13996-201ENSMUST00000118456 430 ntBASIC14.85□□□□□ -0.03
Ube3bQ9ES34 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Gm9230-201ENSMUST00000188228 532 ntBASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Gm45598-202ENSMUST00000210719 986 ntBASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Mir433-201ENSMUST00000093564 124 ntBASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ube3bQ9ES34 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms