Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm8227-201ENSMUST00000223306 571 ntBASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ube4bQ9ES00 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Gm4875-201ENSMUST00000118257 786 ntBASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Gm27306-201ENSMUST00000183970 107 ntBASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube4bQ9ES00 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ube4bQ9ES00 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12□□□□□ -0.49
Ube4bQ9ES00 BC043934-202ENSMUST00000185694 2356 ntBASIC12□□□□□ -0.49
Ube4bQ9ES00 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ube4bQ9ES00 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ube4bQ9ES00 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ube4bQ9ES00 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Gm5638-201ENSMUST00000118618 1258 ntBASIC12□□□□□ -0.49
Ube4bQ9ES00 Mir6956-201ENSMUST00000183598 62 ntBASIC12□□□□□ -0.49
Ube4bQ9ES00 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12□□□□□ -0.49
Ube4bQ9ES00 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ube4bQ9ES00 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ube4bQ9ES00 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12□□□□□ -0.49
Ube4bQ9ES00 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Ube4bQ9ES00 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Gm13859-201ENSMUST00000119936 1423 ntBASIC12□□□□□ -0.49
Ube4bQ9ES00 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Ube4bQ9ES00 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ube4bQ9ES00 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms