Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim54Q9ERP3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim54Q9ERP3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim54Q9ERP3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim54Q9ERP3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim54Q9ERP3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim54Q9ERP3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim54Q9ERP3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim54Q9ERP3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim54Q9ERP3 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim54Q9ERP3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim54Q9ERP3 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim54Q9ERP3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim54Q9ERP3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Gm13296-201ENSMUST00000117854 997 ntBASIC13.57□□□□□ -0.24
Trim54Q9ERP3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Gm6963-201ENSMUST00000147879 379 ntBASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.57□□□□□ -0.24
Trim54Q9ERP3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Gm8913-201ENSMUST00000209491 641 ntBASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Gm18041-201ENSMUST00000218210 618 ntBASIC13.57□□□□□ -0.24
Trim54Q9ERP3 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Abhd11os-203ENSMUST00000222613 363 ntBASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim54Q9ERP3 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Rprl1-202ENSMUST00000198476 238 ntBASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim54Q9ERP3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim54Q9ERP3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim54Q9ERP3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim54Q9ERP3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim54Q9ERP3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim54Q9ERP3 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim54Q9ERP3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim54Q9ERP3 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms