Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.75□□□□□ -0.53
Hmgn3Q9DCB1 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn3Q9DCB1 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn3Q9DCB1 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn3Q9DCB1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn3Q9DCB1 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hmgn3Q9DCB1 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Gm9063-201ENSMUST00000223299 582 ntBASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hmgn3Q9DCB1 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Gm4875-201ENSMUST00000118257 786 ntBASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Gm14921-201ENSMUST00000118643 908 ntBASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Gm25927-201ENSMUST00000175058 117 ntBASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hmgn3Q9DCB1 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Hmgn3Q9DCB1 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms