Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Sf3a3Q9D554 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.65□□□□□ -0.39
Sf3a3Q9D554 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sf3a3Q9D554 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Sf3a3Q9D554 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Gm43094-201ENSMUST00000196549 921 ntBASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sf3a3Q9D554 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Gm44344-201ENSMUST00000200287 129 ntBASIC12.63□□□□□ -0.39
Sf3a3Q9D554 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.63□□□□□ -0.39
Sf3a3Q9D554 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sf3a3Q9D554 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms