Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim13Q9CYB0 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Gm14350-201ENSMUST00000116642 640 ntBASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Gm16202-201ENSMUST00000117532 544 ntBASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Gm9630-201ENSMUST00000178304 885 ntBASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Gm6458-201ENSMUST00000211573 635 ntBASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Gm32390-201ENSMUST00000212713 1172 ntBASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Gm26035-201ENSMUST00000083065 308 ntBASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim13Q9CYB0 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.56□□□□□ -0.56
Trim13Q9CYB0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Gm22189-201ENSMUST00000103822 86 ntBASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Gm13323-201ENSMUST00000120245 1151 ntBASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Gm37102-201ENSMUST00000195740 1105 ntBASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Gm19184-201ENSMUST00000196798 928 ntBASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Gm44069-201ENSMUST00000204898 506 ntBASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.56□□□□□ -0.56
Trim13Q9CYB0 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.56□□□□□ -0.56
Trim13Q9CYB0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trim13Q9CYB0 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms