Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Gm13226-201ENSMUST00000117838 404 ntBASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Gm14660-201ENSMUST00000119809 575 ntBASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Gm45784-201ENSMUST00000188360 142 ntBASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Gm38092-201ENSMUST00000195600 653 ntBASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Khdc3Q9CWU5 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Khdc3Q9CWU5 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12□□□□□ -0.49
Khdc3Q9CWU5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Khdc3Q9CWU5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Gm24526-201ENSMUST00000082921 158 ntBASIC12□□□□□ -0.49
Khdc3Q9CWU5 Gm26035-201ENSMUST00000083065 308 ntBASIC12□□□□□ -0.49
Khdc3Q9CWU5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Gm12846-201ENSMUST00000120431 1373 ntBASIC12□□□□□ -0.49
Khdc3Q9CWU5 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12□□□□□ -0.49
Khdc3Q9CWU5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Khdc3Q9CWU5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms