Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.77□□□□□ -0.36
Cldnd1Q9CQX5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldnd1Q9CQX5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldnd1Q9CQX5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldnd1Q9CQX5 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldnd1Q9CQX5 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldnd1Q9CQX5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cldnd1Q9CQX5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldnd1Q9CQX5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.77□□□□□ -0.36
Cldnd1Q9CQX5 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Mir6998-201ENSMUST00000183343 64 ntBASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Mirlet7i-201ENSMUST00000083472 85 ntBASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldnd1Q9CQX5 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Gm11451-201ENSMUST00000118946 630 ntBASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Gm12516-201ENSMUST00000120819 385 ntBASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Mir1901-201ENSMUST00000122616 78 ntBASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Gm23771-201ENSMUST00000178702 110 ntBASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Gm27910-201ENSMUST00000185004 107 ntBASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Gm28686-201ENSMUST00000187404 609 ntBASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldnd1Q9CQX5 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Gm11509-201ENSMUST00000117358 325 ntBASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cldnd1Q9CQX5 Gm3793-201ENSMUST00000204973 672 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms