Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Gm14350-201ENSMUST00000116642 640 ntBASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Gm6458-201ENSMUST00000211573 635 ntBASIC11.84□□□□□ -0.51
Ska1Q9CPV1 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ska1Q9CPV1 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Ska1Q9CPV1 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ska1Q9CPV1 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.83□□□□□ -0.51
Ska1Q9CPV1 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Gm7063-201ENSMUST00000186840 981 ntBASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Gm2495-201ENSMUST00000191160 466 ntBASIC11.83□□□□□ -0.52
Ska1Q9CPV1 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska1Q9CPV1 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ska1Q9CPV1 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms