Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trem2Q99NH8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.71□□□□□ -0.37
Trem2Q99NH8 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.71□□□□□ -0.37
Trem2Q99NH8 Gm4034-201ENSMUST00000187674 480 ntBASIC12.71□□□□□ -0.37
Trem2Q99NH8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trem2Q99NH8 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.71□□□□□ -0.37
Trem2Q99NH8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trem2Q99NH8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trem2Q99NH8 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trem2Q99NH8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trem2Q99NH8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trem2Q99NH8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trem2Q99NH8 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trem2Q99NH8 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trem2Q99NH8 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trem2Q99NH8 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trem2Q99NH8 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trem2Q99NH8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.7□□□□□ -0.38
Trem2Q99NH8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.7□□□□□ -0.38
Trem2Q99NH8 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.7□□□□□ -0.38
Trem2Q99NH8 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.7□□□□□ -0.38
Trem2Q99NH8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.7□□□□□ -0.38
Trem2Q99NH8 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.7□□□□□ -0.38
Trem2Q99NH8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.7□□□□□ -0.38
Trem2Q99NH8 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.7□□□□□ -0.38
Trem2Q99NH8 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Trem2Q99NH8 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trem2Q99NH8 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trem2Q99NH8 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.69□□□□□ -0.38
Trem2Q99NH8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trem2Q99NH8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trem2Q99NH8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.69□□□□□ -0.38
Trem2Q99NH8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trem2Q99NH8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trem2Q99NH8 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.69□□□□□ -0.38
Trem2Q99NH8 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trem2Q99NH8 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trem2Q99NH8 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trem2Q99NH8 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms