Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.01□□□□□ -0.65
Scrt1Q99M85 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Gm7467-201ENSMUST00000185173 652 ntBASIC11.01□□□□□ -0.65
Scrt1Q99M85 Gm3096-201ENSMUST00000185770 364 ntBASIC11.01□□□□□ -0.65
Scrt1Q99M85 Gm8885-201ENSMUST00000189382 598 ntBASIC11.01□□□□□ -0.65
Scrt1Q99M85 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.01□□□□□ -0.65
Scrt1Q99M85 Gm5904-201ENSMUST00000210286 865 ntBASIC11.01□□□□□ -0.65
Scrt1Q99M85 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Gm8712-201ENSMUST00000221090 701 ntBASIC11.01□□□□□ -0.65
Scrt1Q99M85 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.01□□□□□ -0.65
Scrt1Q99M85 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.01□□□□□ -0.65
Scrt1Q99M85 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.01□□□□□ -0.65
Scrt1Q99M85 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Scrt1Q99M85 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Scrt1Q99M85 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Scrt1Q99M85 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Scrt1Q99M85 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11□□□□□ -0.65
Scrt1Q99M85 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11□□□□□ -0.65
Scrt1Q99M85 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11□□□□□ -0.65
Scrt1Q99M85 Gm8566-201ENSMUST00000120174 465 ntBASIC11□□□□□ -0.65
Scrt1Q99M85 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11□□□□□ -0.65
Scrt1Q99M85 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11□□□□□ -0.65
Scrt1Q99M85 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11□□□□□ -0.65
Scrt1Q99M85 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11□□□□□ -0.65
Scrt1Q99M85 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11□□□□□ -0.65
Scrt1Q99M85 Gm8856-201ENSMUST00000185254 1144 ntBASIC11□□□□□ -0.65
Scrt1Q99M85 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11□□□□□ -0.65
Scrt1Q99M85 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Scrt1Q99M85 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11□□□□□ -0.65
Scrt1Q99M85 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11□□□□□ -0.65
Scrt1Q99M85 Gm43081-201ENSMUST00000199082 1380 ntBASIC11□□□□□ -0.65
Scrt1Q99M85 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Scrt1Q99M85 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.99□□□□□ -0.65
Scrt1Q99M85 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Scrt1Q99M85 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms