Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd3Q99LE3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Gm11930-201ENSMUST00000117788 190 ntBASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Gm13570-201ENSMUST00000140763 309 ntBASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Gm8712-201ENSMUST00000221090 701 ntBASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Gm10076-201ENSMUST00000073238 384 ntBASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd3Q99LE3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Gm24845-201ENSMUST00000158034 109 ntBASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Gm27046-201ENSMUST00000182160 463 ntBASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Gm3096-201ENSMUST00000185770 364 ntBASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lysmd3Q99LE3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms