Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip1Q922J3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip1Q922J3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip1Q922J3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip1Q922J3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clip1Q922J3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Clip1Q922J3 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip1Q922J3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip1Q922J3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip1Q922J3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC19.47■□□□□ 0.71
Clip1Q922J3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip1Q922J3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Clip1Q922J3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC19.47■□□□□ 0.71
Clip1Q922J3 Gm5847-201ENSMUST00000178959 1595 ntBASIC19.46■□□□□ 0.71
Clip1Q922J3 Gm11509-201ENSMUST00000117358 325 ntBASIC19.46■□□□□ 0.71
Clip1Q922J3 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC19.46■□□□□ 0.71
Clip1Q922J3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Clip1Q922J3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clip1Q922J3 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC19.46■□□□□ 0.71
Clip1Q922J3 Gm3508-201ENSMUST00000186012 792 ntBASIC19.46■□□□□ 0.71
Clip1Q922J3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC19.46■□□□□ 0.71
Clip1Q922J3 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC19.46■□□□□ 0.71
Clip1Q922J3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clip1Q922J3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clip1Q922J3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clip1Q922J3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Clip1Q922J3 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clip1Q922J3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC19.46■□□□□ 0.71
Clip1Q922J3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clip1Q922J3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clip1Q922J3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clip1Q922J3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clip1Q922J3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clip1Q922J3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clip1Q922J3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clip1Q922J3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Clip1Q922J3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Gm8343-201ENSMUST00000182705 994 ntBASIC19.45■□□□□ 0.7
Clip1Q922J3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Gm3332-201ENSMUST00000189337 928 ntBASIC19.45■□□□□ 0.7
Clip1Q922J3 Gm5733-201ENSMUST00000190232 939 ntBASIC19.45■□□□□ 0.7
Clip1Q922J3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC19.45■□□□□ 0.7
Clip1Q922J3 Gm43184-201ENSMUST00000197247 542 ntBASIC19.45■□□□□ 0.7
Clip1Q922J3 Gm42682-201ENSMUST00000198349 1265 ntBASIC19.45■□□□□ 0.7
Clip1Q922J3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC19.45■□□□□ 0.7
Clip1Q922J3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Clip1Q922J3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Ksr1-207ENSMUST00000226282 5260 ntBASIC19.45■□□□□ 0.7
Clip1Q922J3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC19.45■□□□□ 0.7
Clip1Q922J3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clip1Q922J3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Clip1Q922J3 Gm26286-201ENSMUST00000104166 134 ntBASIC19.44■□□□□ 0.7
Clip1Q922J3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Clip1Q922J3 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Clip1Q922J3 Gm7722-201ENSMUST00000120646 741 ntBASIC19.44■□□□□ 0.7
Clip1Q922J3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC19.44■□□□□ 0.7
Clip1Q922J3 Rprl1-201ENSMUST00000158050 327 ntBASIC19.44■□□□□ 0.7
Clip1Q922J3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Clip1Q922J3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Clip1Q922J3 Mir6546-201ENSMUST00000184460 62 ntBASIC19.44■□□□□ 0.7
Clip1Q922J3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC19.44■□□□□ 0.7
Clip1Q922J3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC19.44■□□□□ 0.7
Clip1Q922J3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Gm26448-201ENSMUST00000082446 203 ntBASIC19.44■□□□□ 0.7
Clip1Q922J3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Clip1Q922J3 Gm42928-201ENSMUST00000197338 3339 ntBASIC19.44■□□□□ 0.7
Clip1Q922J3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clip1Q922J3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms