Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.63□□□□□ -0.07
Pcdhb22Q91XZ8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Gm25214-201ENSMUST00000104573 129 ntBASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Gm12849-201ENSMUST00000120013 739 ntBASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Gm6621-201ENSMUST00000193251 772 ntBASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.62□□□□□ -0.07
Pcdhb22Q91XZ8 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Gm14363-201ENSMUST00000122304 409 ntBASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Gm2991-201ENSMUST00000173338 480 ntBASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Gm42937-201ENSMUST00000197360 752 ntBASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Gm21769-201ENSMUST00000211922 111 ntBASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Pcdhb22Q91XZ8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Gm26956-201ENSMUST00000182176 986 ntBASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Gm43721-201ENSMUST00000199677 2313 ntBASIC14.6□□□□□ -0.07
Pcdhb22Q91XZ8 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms