Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdhga3Q91XY5 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdhga3Q91XY5 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.2□□□□□ -0.62
Pcdhga3Q91XY5 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdhga3Q91XY5 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Pcdhga3Q91XY5 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdhga3Q91XY5 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdhga3Q91XY5 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdhga3Q91XY5 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdhga3Q91XY5 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdhga3Q91XY5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Pcdhga3Q91XY5 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.2□□□□□ -0.62
Pcdhga3Q91XY5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Pcdhga3Q91XY5 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Gm17208-201ENSMUST00000168388 535 ntBASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Gm5745-201ENSMUST00000183748 313 ntBASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Gm37042-201ENSMUST00000193816 581 ntBASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Pcdhga3Q91XY5 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Gm14921-201ENSMUST00000118643 908 ntBASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Gm17150-201ENSMUST00000165577 381 ntBASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Gm8602-201ENSMUST00000184045 607 ntBASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Gm8099-201ENSMUST00000200510 742 ntBASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Gm4768-201ENSMUST00000206199 686 ntBASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pcdhga3Q91XY5 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms