Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Gm19931-201ENSMUST00000198920 368 ntBASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Gm6082-201ENSMUST00000215204 454 ntBASIC14.39□□□□□ -0.11
Ddx41Q91VN6 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ddx41Q91VN6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Mir874-201ENSMUST00000104769 76 ntBASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Gm25668-201ENSMUST00000157700 129 ntBASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ddx41Q91VN6 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Gm14726-201ENSMUST00000120623 896 ntBASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Gm38092-201ENSMUST00000195600 653 ntBASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ddx41Q91VN6 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.36□□□□□ -0.11
Ddx41Q91VN6 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms