Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Rmrp-201ENSMUST00000157463 271 ntBASIC12.94□□□□□ -0.34
Trim60Q8VI40 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim60Q8VI40 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.94□□□□□ -0.34
Trim60Q8VI40 Gm42599-201ENSMUST00000201308 469 ntBASIC12.94□□□□□ -0.34
Trim60Q8VI40 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.94□□□□□ -0.34
Trim60Q8VI40 Gm19163-201ENSMUST00000223313 780 ntBASIC12.94□□□□□ -0.34
Trim60Q8VI40 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.94□□□□□ -0.34
Trim60Q8VI40 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim60Q8VI40 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim60Q8VI40 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.94□□□□□ -0.34
Trim60Q8VI40 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.93□□□□□ -0.34
Trim60Q8VI40 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Gm24196-201ENSMUST00000179161 110 ntBASIC12.93□□□□□ -0.34
Trim60Q8VI40 Gm45384-201ENSMUST00000210451 277 ntBASIC12.93□□□□□ -0.34
Trim60Q8VI40 Gm6180-201ENSMUST00000065243 498 ntBASIC12.93□□□□□ -0.34
Trim60Q8VI40 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Gm10012-201ENSMUST00000078252 192 ntBASIC12.93□□□□□ -0.34
Trim60Q8VI40 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim60Q8VI40 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.93□□□□□ -0.34
Trim60Q8VI40 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.93□□□□□ -0.34
Trim60Q8VI40 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim60Q8VI40 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim60Q8VI40 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim60Q8VI40 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.92□□□□□ -0.34
Trim60Q8VI40 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim60Q8VI40 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim60Q8VI40 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim60Q8VI40 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim60Q8VI40 Gm11814-201ENSMUST00000119515 929 ntBASIC12.92□□□□□ -0.34
Trim60Q8VI40 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim60Q8VI40 Gm23984-201ENSMUST00000157139 203 ntBASIC12.92□□□□□ -0.34
Trim60Q8VI40 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.92□□□□□ -0.34
Trim60Q8VI40 Gm6244-201ENSMUST00000178732 841 ntBASIC12.92□□□□□ -0.34
Trim60Q8VI40 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trim60Q8VI40 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trim60Q8VI40 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trim60Q8VI40 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.92□□□□□ -0.34
Trim60Q8VI40 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.92□□□□□ -0.34
Trim60Q8VI40 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim60Q8VI40 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim60Q8VI40 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms