Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Gm5950-201ENSMUST00000213337 772 ntBASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ndc1Q8VCB1 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Gm23270-201ENSMUST00000104055 131 ntBASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Gm25214-201ENSMUST00000104573 129 ntBASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Gm14921-201ENSMUST00000118643 908 ntBASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Gm29199-201ENSMUST00000187766 775 ntBASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Gm45925-201ENSMUST00000218882 744 ntBASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ndc1Q8VCB1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Gm44405-201ENSMUST00000198952 126 ntBASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 CT485787.1-201ENSMUST00000225617 968 ntBASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Mir433-201ENSMUST00000093564 124 ntBASIC11.82□□□□□ -0.52
Ndc1Q8VCB1 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms