Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc9Q8VC31 AC125374.1-201ENSMUST00000213573 1400 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm22065-201ENSMUST00000103753 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm22066-201ENSMUST00000103761 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm24932-201ENSMUST00000103763 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm24115-201ENSMUST00000103799 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm22190-201ENSMUST00000103827 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm22191-201ENSMUST00000103831 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm24721-201ENSMUST00000103849 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm28018-201ENSMUST00000103869 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm26399-201ENSMUST00000103937 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm25349-201ENSMUST00000177728 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm23616-201ENSMUST00000177797 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm25871-201ENSMUST00000177816 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm24752-201ENSMUST00000178240 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm24496-201ENSMUST00000178287 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm25649-201ENSMUST00000178476 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm25548-201ENSMUST00000178681 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm23147-201ENSMUST00000178841 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm26095-201ENSMUST00000179270 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm22171-201ENSMUST00000179283 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm23936-201ENSMUST00000179354 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm22619-201ENSMUST00000179516 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm25255-201ENSMUST00000179579 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm24755-201ENSMUST00000179691 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm26506-201ENSMUST00000179692 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm25086-201ENSMUST00000179931 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm23243-201ENSMUST00000180047 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm24659-201ENSMUST00000180212 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm24169-201ENSMUST00000180244 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm23689-201ENSMUST00000180354 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm27359-201ENSMUST00000184153 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm27785-201ENSMUST00000184268 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm27466-201ENSMUST00000184396 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm27703-201ENSMUST00000184836 110 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm44335-201ENSMUST00000196879 141 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm44297-201ENSMUST00000198304 141 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm44346-201ENSMUST00000198851 141 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc9Q8VC31 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc9Q8VC31 Gm29100-201ENSMUST00000187564 4410 ntBASIC15.03■□□□□ -0
Ccdc9Q8VC31 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Mir698-201ENSMUST00000102164 109 ntBASIC15.03■□□□□ -0
Ccdc9Q8VC31 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc9Q8VC31 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms