Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Gm38144-201ENSMUST00000192790 465 ntBASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Gm19220-201ENSMUST00000222682 803 ntBASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Gm8227-201ENSMUST00000223306 571 ntBASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Slf1Q8R3P9 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Mir6977-201ENSMUST00000184960 64 ntBASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Gm29608-201ENSMUST00000190444 463 ntBASIC12.63□□□□□ -0.39
Slf1Q8R3P9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Slf1Q8R3P9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slf1Q8R3P9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slf1Q8R3P9 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slf1Q8R3P9 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slf1Q8R3P9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Slf1Q8R3P9 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slf1Q8R3P9 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slf1Q8R3P9 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slf1Q8R3P9 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.62□□□□□ -0.39
Slf1Q8R3P9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slf1Q8R3P9 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slf1Q8R3P9 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slf1Q8R3P9 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Slf1Q8R3P9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Slf1Q8R3P9 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms