Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.62□□□□□ -0.55
Rfc3Q8R323 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rfc3Q8R323 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Gm26083-201ENSMUST00000157904 193 ntBASIC11.61□□□□□ -0.55
Rfc3Q8R323 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.61□□□□□ -0.55
Rfc3Q8R323 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.61□□□□□ -0.55
Rfc3Q8R323 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rfc3Q8R323 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Gm14381-201ENSMUST00000122105 414 ntBASIC11.6□□□□□ -0.55
Rfc3Q8R323 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Gm17376-201ENSMUST00000166016 84 ntBASIC11.6□□□□□ -0.55
Rfc3Q8R323 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.6□□□□□ -0.55
Rfc3Q8R323 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.6□□□□□ -0.55
Rfc3Q8R323 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.6□□□□□ -0.55
Rfc3Q8R323 Gm5904-201ENSMUST00000210286 865 ntBASIC11.6□□□□□ -0.55
Rfc3Q8R323 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.6□□□□□ -0.55
Rfc3Q8R323 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms