Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Gm11591-201ENSMUST00000120063 702 ntBASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim29Q8R2Q0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Gm7809-201ENSMUST00000153199 742 ntBASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Mir1982-201ENSMUST00000157368 74 ntBASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Gm8738-201ENSMUST00000172606 329 ntBASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Snora73a-201ENSMUST00000082453 205 ntBASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim29Q8R2Q0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Gm24231-201ENSMUST00000104315 133 ntBASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Gm3890-201ENSMUST00000182416 207 ntBASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Gm45925-201ENSMUST00000218882 744 ntBASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Gm22058-201ENSMUST00000083393 310 ntBASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.28□□□□□ -0.12
Trim29Q8R2Q0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim29Q8R2Q0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trim29Q8R2Q0 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim29Q8R2Q0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms