Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm13342-201ENSMUST00000121055 207 ntBASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Gm45331-201ENSMUST00000209868 554 ntBASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 AC169036.1-201ENSMUST00000227994 296 ntBASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Sf3a1Q8K4Z5 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Gm2546-201ENSMUST00000182630 991 ntBASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Sf3a1Q8K4Z5 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Gm15198-201ENSMUST00000117283 177 ntBASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Gm12241-201ENSMUST00000118330 726 ntBASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Gm9368-201ENSMUST00000219348 831 ntBASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Sf3a1Q8K4Z5 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Sf3a1Q8K4Z5 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms